If we could start the world over again, would life evolve the same way?

By Emily Singer

 In his fourth-floor lab at Harvard University, Michael Desai has created hundreds of  identical worlds in order to watch evolution at work. Each of his meticulously controlled environments is home to a separate strain of baker’s yeast. Every 12 hours, Desai’s robot assistants pluck out the fastest-growing yeast in each world — selecting the fittest to live on — and discard the rest. Desai then monitors the strains as they evolve over the course of 500 generations. His experiment, which other scientists say is unprecedented in scale, seeks to gain insight into a question that has long bedeviled biologists: If we could start the world over again, would life evolve the same way?

Michael Desai

Many biologists argue that it would not, that chance mutations early in the evolutionary journey of a species will profoundly influence its fate. “If you replay the tape of life, you might have one initial mutation that takes you in a totally different direction,” Desai said, paraphrasing an idea first put forth by the biologist Stephen Jay Gould in the 1980s.

Desai’s yeast cells call this belief into question. According to results published in Science in June, all of Desai’s yeast varieties arrived at roughly the same evolutionary endpoint (as measured by their ability to grow under specific lab conditions) regardless of which precise genetic path each strain took. It’s as if 100 New York City taxis agreed to take separate highways in a race to the Pacific Ocean, and 50 hours later they all converged at the Santa Monica pier.

The findings also suggest a disconnect between evolution at the genetic level and at the level of the whole organism. Genetic mutations occur mostly at random, yet the sum of these aimless changes somehow creates a predictable pattern. The distinction could prove valuable, as much genetics research has focused on the impact of mutations in individual genes. For example, researchers often ask how a single mutation might affect a microbe’s tolerance for toxins, or a human’s risk for a disease. But if Desai’s findings hold true in other organisms, they could suggest that it’s equally important to examine how large numbers of individual genetic changes work in concert over time.

“There’s a kind of tension in evolutionary biology between thinking about individual genes and the potential for evolution to change the whole organism,” said Michael Travisano, a biologist at the University of Minnesota. “All of biology has been focused on the importance of individual genes for the last 30 years, but the big take-home message of this study is that’s not necessarily important.”

Yeast on plates.

The key strength in Desai’s experiment is its unprecedented size, which has been described by others in the field as “audacious.” The experiment’s design is rooted in its creator’s background; Desai trained as a physicist, and from the time he launched his lab four years ago, he applied a statistical perspective to biology. He devised ways to use robots to precisely manipulate hundreds of lines of yeast so that he could run large-scale evolutionary experiments in a quantitative way. Scientists have long studied the genetic evolution of microbes, but until recently, it was possible to examine only a few strains at a time. Desai’s team, in contrast, analyzed 640 lines of yeast that had all evolved from a single parent cell. The approach allowed the team to statistically analyze evolution.

http://www.simonsfoundation.org/quanta/20140911-evolutions-random-paths-all-lead-to-the-same-place/

Posted By F. Sheikh

 

“Travelling Back In Time ” Closer To Reality ? By Lee Billing

What would happen to you if you went back in time and killed your grandfather? A model using photons reveals that quantum mechanics can solve the quandary—and even foil quantum cryptography

Recently Ralph and his PhD student Martin Ringbauer led a team that experimentally simulated Deutsch’s model of CTCs( Closed Time like Curve)  for the very first time, testing and confirming many aspects of the two-decades-old theory. Their findings are published in Nature Communications. Much of their simulation revolved around investigating how Deutsch’s model deals with the “grandfather paradox,” a hypothetical scenario in which someone uses a CTC to travel back through time to murder her own grandfather, thus preventing her own later birth. (Scientific American is part of Nature Publishing Group.)

Deutsch’s quantum solution to the grandfather paradox works something like this:

Instead of a human being traversing a CTC to kill her ancestor, imagine that a fundamental particle goes back in time to flip a switch on the particle-generating machine that created it. If the particle flips the switch, the machine emits a particle—the particle—back into the CTC; if the switch isn’t flipped, the machine emits nothing. In this scenario there is no a priori deterministic certainty to the particle’s emission, only a distribution of probabilities. Deutsch’s insight was to postulate self-consistency in the quantum realm, to insist that any particle entering one end of a CTC must emerge at the other end with identical properties. Therefore, a particle emitted by the machine with a probability of one half would enter the CTC and come out the other end to flip the switch with a probability of one half, imbuing itself at birth with a probability of one half of going back to flip the switch. If the particle were a person, she would be born with a one-half probability of killing her grandfather, giving her grandfather a one-half probability of escaping death at her hands—good enough in probabilistic terms to close the causative loop and escape the paradox. Strange though it may be, this solution is in keeping with the known laws of quantum mechanics. 

http://www.scientificamerican.com/article/time-travel-simulation-resolves-grandfather-paradox/

Posted By F. Sheikh

 

Subject: Setting rivers free: As dams are torn down, nature is quickly recovering – CSMonitor.com||

The article in the Christian Science Monitor carries a critical message we humans would do well to remember. Mother nature is far more adaptable than we think. It is a good lesson for people who deny climate change.  When humans improve their behavior, nature rewards and we are all better for it.

Nasik Elahi

Setting rivers free: As dams are torn down, nature is quickly recovering –
CSMonitor.com
http://www.csmonitor.com/Environment/2014/0803/Setting-rivers-free-As-dams-are-torn-down-nature-is-quickly-recovering#.U-ex2XpqJlQ.email

 

 

“The De-Darwinizing of Cultural Change” By Daniel C. Dennett

Interesting talk on how much Darwinian evolution plays its part in our lives and when De-Darwinism starts. (Posted By F. Sheikh )

You can’t explain human competence all in terms of genetic evolution. You need cultural evolution as well, and that cultural evolution is profoundly Darwinian in the early days. And as time has passed, it has become more and more non-Darwinian.

I have an example that I use when I’m writing about this, well, two examples: One is Turing’s computer. If there ever was a top-down design, that’s it. I mean, they would not have given him the money to build the Manchester Computer if he didn’t have proof of concept and drawings. This was the idea, the understanding preceding the physical reality. Just the opposite of, say, a termite colony, which is bottom-up designed, and although it’s brilliantly designed, it’s a product of little entities that are themselves non-comprehending but very competent in very limited ways.

Think for a moment about a termite colony or an ant colony—amazingly competent in many ways, we can do all sorts of things, treat the whole entity as a sort of cognitive agent and it accomplishes all sorts of quite impressive behavior. But if I ask you, “What is it like to be a termite colony?” most people would say, “It’s not like anything.” Well, now let’s look at a brain, let’s look at a human brain—100 billion neurons, roughly speaking, and each one of them is dumber than a termite and they’re all sort of semi-independent. If you stop and think about it, they’re all direct descendants of free-swimming unicellular organisms that fended for themselves for a billion years on their own. There’s a lot of competence, a lot of can-do in their background, in their ancestry. Now they’re trapped in the skull and they may well have agendas of their own; they have competences of their own, no two are alike. Now the question is, how is a brain inside a head any more integrated, any more capable of there being something that it’s like to be that than a termite colony? What can we do with our brains that the termite colony couldn’t do or maybe that many animals couldn’t do?

It seems to me that we do actually know some of the answer, and it has to do with mainly what Fiery Cushman was talking about—it’s the importance of the cultural niche and the cognitive niche, and in particular I would say you couldn’t have the cognitive niche without the cultural niche because it depends on the cultural niche.

What I’m working on these days is to try to figure out—in a very speculative way, but as anchored as I can to whatever people think they know right now about the relevant fields—how culture could prune, tame, organize, structure brains to make language possible and then to make higher cognition (than reason, and so forth) possible on top of that. If you ask the chicken-egg question—which came first—did we first get real smart so that now we could have culture? Or did we get culture and that enabled us to become smart? The answer to that is yes, it’s both, it’s a co-evolutionary process.

What particularly interests me about that is I am now thinking about culture and its role in creating the human mind as a process, which begins very Darwinian and becomes less Darwinian as time goes by. This is the de-Darwinizing of cultural change in the world.

http://edge.org/panel/daniel-c-dennett-the-de-darwinizing-of-cultural-change-headcon-13-part-x